Affinity
purification of a -Skp1, a
-Pip1 and a -Pcu1
A 25ml Sera
24-GST-Pip1-G (day 84)
24-MBP-Pcu1-C (day 77)
24-MBP-Skp1-E (day 84)
-
thaw sera in a waterbath
-
fill up to 25ml with PBS
-
spin in glass corex/transpartent plastic tubes, 15k, 10min, 4°
C (SS-34); balance with PBS
-
collect supernatant and discard pellet
-
add (slowly) 4.4g Ammoniumsulfate (30%) to supernatant (25ml), use a stirrer
-
spin in glass corex/transpartent plastic tubes, 17k, 20min, 4°
C
-
discard pellet
-
add (slowly) 3.1g Ammoniumsulfate (50%) to the supernatant
-
spin in glass corex/transpartent plastic tubes, 17k, 20min, 4°
C
-
resuspend pellet in 10ml PBS, discard supernatant
-
spin in glass corex/transpartent plastic tubes, 17k, 20min, 4°
C
-
dialyze supernatant o/n in PBS
B Aqueous coupling of proteins to Affi-Gel 15 affinity support
Do not use buffers such as Tris or glycine.
The Affi-gel 10 support couples proteins best at a pH near or below
their isoelectric point, and the Affi-Gel 15 support couples proteins best
near or above their isoelectric point. Therefore the Affi-Gel 15 support
is recommended for proteins with isoelectric points below 6.5 (acidic proteins).
-
Dialyze proteins o/n against 100mM Sodium-bicarbonate buffer (»
pH8.2)
MBP-Pip1 (» 5.5 ml; 2.8 mg/ml)
MBP-Pcu1 (» 2.8 ml; 1 mg/ml)
GST-Skp1 (» 2.5ml; 4 mg/ml)
-
Affi-Gel 15: shake vial and make sure that you have a uniform suspension
-
transfer 2ml of a 50% slurry to a column or glass fritted funnel
-
drain the supernatant solvent
-
wash the gel with three bed volumes of water
for optimum coupling the washing procedure should be completed and
the gel combined with the ligand solution within 20min
-
add » 1ml beads to protein
add at least 0.5ml of ligand solution per ml of gel
protein concentration of <25mg/ml of gel will yield less than optimum
result
volume of ligand should not exceed 4.5ml/ml of gel
-
incubate o/n (or at least 4h) at 4° C and
agitate sufficiently to make a uniform suspension
-
test supernatant and beads with Bradford reagent
compare to input solution
-
add 0.1ml/ml gel of a 1M Ethanolamine-HCl, pH 8 solution
-
block for 1h
-
let gel settle down for about 10min
-
remove supernatant and store at 4° C (for
security reason)
-
resuspend gel in 5ml PBS
-
transfer the gel to a column
-
wash with 10ml PBS (pump speed » 1ml/min
[» level 7])
C Column purification
-
add beads (coupled with protein) to column (see B)
for all next steps: pump speed » 1ml/min
(» level 7)
-
wash with 10ml 100mM Glycine-HCl pH 2.5
-
wash with 10ml 10mM Tris-HCl pH 9
-
wash with 10ml 100mM Triethanolamine pH 11.5
-
wash with 10ml 10mM Tris-HCl pH 6.8
-
wash with 10ml PBS
-
load antibodies to column (see A)
-
2 h circuit
-
wash with 20ml 10mM Tris-HCl pH 7.5
one can increase pump speed from level 7 to level 9
-
wash with 20ml 10mM Tris-HCl pH 7.5, 500mM NaCl
-
wash with 20ml 10mM Tris-HCl pH 7.5
Next steps: it is important to remove the eluted antibody from the
eluant as quickly as possible to minimize the chance of denaturation. The
sample should be neutralized immediately following elution!
-
elute with 100mM Glycine-HCl pH 2.5: 1ml into 100m
l 1M Tris-HCl, pH 9 (about 10 tubes)
mix tubes carefully
check protein concentration with Bradford
pool positive fractions
-
neutralize column with 10mM Tris-HCl pH 7.5 (about 10ml)
-
check pH
-
elute with 10ml 100mM Triethanolamine pH 11.5: 1ml into 100m
l 1M Tris-HCl, pH 6.8 (about 10 tubes)
mix tubes carefully
check protein concentration with Bradford
pool positive fractions
-
neutralize column with 10ml 10mM Tris-HCl pH 7.5 (about 10ml)
-
wash column with 10ml PBS, 1mM DTT and store at 4°
C
-
concentrate pooled antibody fractions with 10k concentrators (ca. 250mg
/ml )
block concentrators before use with 3% BSA
-
add Thimerosal (1x final, =0.1%)
-
store at 4° C
-
test antibodies
-